BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B08SP1|AL430496
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1479 0.0
3x_Contig1790 193 4e-49
3x_Contig1560 151 2e-36
3x_Contig1804 121 3e-27
>3x_Contig1802
Length = 45229
Score = 1479 bits (734), Expect = 0.0
Identities = 878/929 (94%), Gaps = 12/929 (1%)
Strand = Plus / Plus
Query: 1 gtgtgcggctgttncactggatattcatcatgttttgta-gtagggacttkgcatagagg 59
||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 41820 gtgtgcggctgttggactggatattcatcatgttttgtatgtagggacttggcatagagg 41879
Query: 60 gttagcagtattgatgtaactgg--atg-ccattctgatttgtagttgttaatgaaataa 116
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 41880 gttagcagtattgatgtaactgtgtatgtccattctgatttgtagttgttaatgaaataa 41939
Query: 117 tggwtaattgaattgatgattgacttacttaagtaagctagctacttacggtgttctcct 176
||| ||||||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct: 41940 tggataattgaattgatgattgaat-acataagtaagctagctacttacggtgttctcct 41998
Query: 177 tggtttgttacatgtgacacgtaagttaatgtagaagaataattaatatgcgaccaaatt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41999 tggtttgttacatgtgacacgtaagttaatgtagaagaataattaatatgcgaccaaatt 42058
Query: 237 ccgatgggaaaattggatgaagaaagcctctacccatatacttttggattgggattccga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42059 ccgatgggaaaattggatgaagaaagcctctacccatatacttttggattgggattccga 42118
Query: 297 tccccgaaacgctgtagccttggtccaataattgactcctgagaaaatgctcctacaacg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42119 tccccgaaacgctgtagccttggtccaataattgactcctgagaaaatgctcctacaacg 42178
Query: 357 gcagggaacaacaaaataamactatggaaccatcttatacatttaacacgtgactggaaa 416
||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 42179 gcagggaacaacaaattaacactatggatccatcttatacatttaacacgtgactggaaa 42238
Query: 417 tagcgttatcacgaataacttgaacattcgattattcaactttatttcttttttttttcc 476
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 42239 tagcgttatcacgaataacttgaacattcgattattcaacttt-tttcttttttttttcc 42297
Query: 477 atccattcaattccgtttcgagagaaggaagatctcgctgcatccaaatataaaaacctt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42298 atccattcaattccgtttcgagagaaggaagatctcgctgcatccaaatataaaaacctt 42357
Query: 537 aatttttcttgattatcattaaaatcgctctaatcttaaactttgtttaggttcgagaag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42358 aatttttcttgattatcattaaaatcgctctaatcttaaactttgtttaggttcgagaag 42417
Query: 597 gatgcaaaaaaatggaccaattgcacaacaagatgacgagtkatctaactattcgccaat 656
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 42418 gatgcaaaaaaatggaccaattgcacaacaagatgacgagtgatctaactattcgccaat 42477
Query: 657 gcaccccagatgatattgatatattadhkgcattatgcmgaactacaatttkaggaga-c 715
|||||||||||||||||||||||||| ||||||||| ||||||| |||| ||||| |
Sbjct: 42478 gcaccccagatgatattgatatattaaaggcattatgcagaactac-attttgggagacc 42536
Query: 716 attggwgcarataacacagaagagaatttaraarmaatgtatgaaggaragttttaatka 775
|||| ||| ||||||| |||||||||||| || ||||| || |||| ||||||||| |
Sbjct: 42537 tttggtgcagataacactgaagagaatttagaagcaatgtttg-aggagagttttaatga 42595
Query: 776 wgctgtcttkaaaaaadaratcccttkgatgaacatagccatatctgcctactatttttt 835
|||||||| |||||| | |||| | |||||||||||||||||||||||||||||||||
Sbjct: 42596 tgctgtcttgaaaaaagagatcc--ttgatgaacatagccatatctgcctactatttttt 42653
Query: 836 kacaatgaagctgcagcgatcaacaaagtgaatgaccaaaaatcccagacagaaggatat 895
||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||
Sbjct: 42654 gacaatgaagctgcagcgttcatcaaagtgaatgaccataaatcccagacag-aggatat 42712
Query: 896 agggactgaatacgtkgaaatacaacgta 924
|||||||||||||| ||| |||||||||
Sbjct: 42713 ggggactgaatacgtggaattacaacgta 42741
>3x_Contig1790
Length = 27369
Score = 193 bits (96), Expect = 4e-49
Identities = 224/265 (84%), Gaps = 6/265 (2%)
Strand = Plus / Minus
Query: 17 ctggatattcatcatgttttgtagtagggacttkgcatagagggttagcagtattgatgt 76
||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||| |||
Sbjct: 5300 ctggatattcatcatgtttggtagtagggacttggcctagagggttagtagtattggtgt 5241
Query: 77 aactggatgccattctgatttgtagttgttaatgaaataatggwtaattgaattgatgat 136
|| | ||||||||||||| ||||||||||||||||| ||||| || || ||||| ||||
Sbjct: 5240 aaatagatgccattctgacttgtagttgttaatgaataaatggatagttaaattggtgat 5181
Query: 137 tgacttacttaagtaagctagctacttacggtgttctccttggtttgttacatgtgacac 196
||| || ||||||| | ||||||||||| ||||||| |||| |||||| |||||
Sbjct: 5180 cgac-taattaagta----aattacttacggtgctctcctt-gtttcttacatctgacat 5127
Query: 197 gtaagttaatgtagaagaataattaatatgcgaccaaattccgatgggaaaattggatga 256
|||||||||||||| ||||||||||||| | ||||| | ||||| ||||||||||||
Sbjct: 5126 acaagttaatgtagaacaataattaatatgtcatcaaatccagatggaaaaattggatga 5067
Query: 257 agaaagcctctacccatatactttt 281
||||| | ||||| ||||||||||
Sbjct: 5066 agaaaccatctacttatatactttt 5042
>3x_Contig1560
Length = 9209
Score = 151 bits (75), Expect = 2e-36
Identities = 88/93 (94%)
Strand = Plus / Plus
Query: 16 actggatattcatcatgttttgtagtagggacttkgcatagagggttagcagtattgatg 75
|||||||||||||||||||| ||||||||| ||| |||||||| ||||| ||||||||||
Sbjct: 2005 actggatattcatcatgtttggtagtaggggcttggcatagagcgttagtagtattgatg 2064
Query: 76 taactggatgccattctgatttgtagttgttaa 108
|||||||||||||||||||||||||||||||||
Sbjct: 2065 taactggatgccattctgatttgtagttgttaa 2097
>3x_Contig1804
Length = 51183
Score = 121 bits (60), Expect = 3e-27
Identities = 91/101 (90%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 10 tgttncactggatattcatcatgttttgtagtagggacttkgcatagagggttagcagta 69
|||| |||||||||||||||| |||| ||||||||| ||| | ||||||||||| ||||
Sbjct: 51084 tgttgcactggatattcatcaagtttggtagtaggggcttgacctagagggttagtagta 51143
Query: 70 ttgatgtaactggatgccattctgatttgtagttgttaatg 110
|||||||||||||||| |||||||| |||||||||||||||
Sbjct: 51144 ttgatgtaactggatg-cattctgacttgtagttgttaatg 51183
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7872
Number of Sequences: 1807
Number of extensions: 7872
Number of successful extensions: 335
Number of sequences better than 1.0e-20: 4
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)